Meyer Lemon Poppy Seed Muffins
Meyer lemon poppy seed muffins are the perfect balance of tart and sweet with just the right amount of citrus zing. This easy, budget-friendly recipe comes together quickly for a delicious weekend breakfast or a grab-and-go breakfast treat for weekday mornings.

I love lemon poppy seed quick bread so much but when we've just harvested the Meyer lemons from our patio tree, I'm eager to use them for our breakfast treats, too.
This easy Meyer lemon poppy seed muffin recipe is the perfect way to prep single-serving breakfast treats you can freeze for busy mornings later. I love baking them to help make the most out of our lemon harvest.
And if you love lemon poppy seed as much as I do, don't miss these lemon poppy seed cookies. They freeze great, too.
Why This is the Best Recipe
- Bright Flavor: Using the juice and zest from fresh Meyer lemons give these muffins just the right amount of citrusy kick. They are sweet and not too acidic.
- Soft and Moist: Sour cream adds richness and tenderness to the crumb of the muffins giving them a delicious spring to each bite.
- Easy Batch Baking: This recipe works great in either standard or jumbo muffin tins so you can bake a batch to enjoy now or freeze for later.
Ingredients

With pantry staples and fresh lemons, you're just steps away from bakery-style muffins:
- Meyer Lemons: I use the ones my husband grows on our patio tree but you can find them in most grocery stores during the winter. If Meyer lemons are out of season, a regular lemon will work but the muffins will have a stronger citrus flavor.
- Butter
- Eggs
- Sour Cream: I use light sour cream in my baking. You can use full fat but I do not recommend fat-free.
- Vanilla
- All-Purpose Flour
- Sugar
- Baking Powder
- Baking Soda
- Kosher Salt
- Poppy Seeds
- Sparkling Sugar: Optional, I use this to decorate the top when I don't want to decorate them with a drizzle of fresh lemon glaze.
Meyer Lemons vs. Classic Lemons
This recipe was developed with our favorite Meyer lemons in mind. They give the muffins a milder lemon flavor.

If you're new to Meyer lemons, they taste like a cross between a lemon and an orange. They are still citrusy but just have a more gentle flavor than a classic lemon.
Regular lemons have a stronger, punchier lemon flavor and much thicker skins.
You can use whichever you have on hand, the muffins will be delicious either way.
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Prep the Muffin Batter
In a large mixing bowl, whisk together the lemon juice, lemon zest, and melted butter. The juice will cool the melted butter down. Add the eggs and whisk until smooth.
Then add the sour cream and vanilla and whisk them in until smooth.

In a separate mixing bowl, whisk together the dry ingredients: flour, sugar, baking powder, baking soda, salt, and poppy seeds.
Add the dry ingredients to the wet ingredients and gently fold them together with a spatula. Be careful to not over mix, it's ok if there are just a few scant dry spots left in the muffin batter.
If you over mix them, they'll get tough. Using a gentle hand in folding will keep them light and springy.
Fill the Muffin Tin
I prefer to bake with a classic 12-well muffin tin with paper liners for my muffins.
You could use a silicone muffin tin if you prefer to skip the wrappers.
This recipe would also work with a 6-well jumbo muffin tin.

If you're using the sparkling sugar instead of the lemon glaze, sprinkle it on now before baking.
Baking Instructions
Preheat the oven to 350°F.
Bake the muffins for 20 - 22 minutes for standard muffins or for 25 - 28 minutes for jumbo muffins. The tops should be golden brown and spring back when lightly pressed.
Make the Lemon Glaze (Optional)
For a pretty finishing touch, you can drizzle fresh lemon glaze over the top of the muffins once they have completely cooled.
If I'm baking the muffins for storing and freezing, I use just the sparkling sugar.
If I'm baking the muffins to share for a special holiday brunch, I use the glaze for a prettier presentation.
Both methods are very delicious.
Make Ahead Tips
Homemade muffins store really well in an airtight container at room temperature for up to 3 days or in the fridge for 5.
You can reheat them in the microwave for 20 seconds or so to give them that fresh-from-the-oven warmth.
For longer storage, you can freeze completely cooled muffins in an airtight container. I recommend letting them thaw in the fridge overnight. You can warm them either in the microwave or on a sheet pan in the oven for just a few minutes to restore their texture.
If you plan to freeze them and reheat, use the sparkling sugar topping instead of the lemon glaze which may melt into the muffin once reheated.
Serving Suggestions

Lemon poppy seed muffins are a delightful addition to an Easter brunch, an afternoon tea party, or a Mother's Day brunch.
Serve them alongside your favorite coffee or with a fresh pot of tea.
For a heartier breakfast, you could pair them with a platter of scrambled eggs and vegetables or serve an easy quiche, light green salad tossed with lemon parmesan vinaigrette, and these muffins in a basket on the side.
More Breakfast Pastry Recipes
Love baking special treats for your family? Don't miss my delicious breakfast pastry recipes, I have all the muffins, scones, and cinnamon rolls you could want!
📖 Recipe

Meyer Lemon Poppy Seed Muffins
Ingredients
- 2 Meyer lemons zested and juiced
- 6 tablespoons butter melted
- 2 eggs
- 1/3 cup sour cream
- 1 teaspoon vanilla
- 1 1/3 cups all-purpose flour
- 3/4 cup sugar
- 3/4 teaspoon baking powder
- 1/2 teaspoon baking soda
- 1/2 teaspoon kosher salt
- 1/3 cup poppy seeds
For Topping: (Pick One)
- 2 tablespoons sparkling sugar best option if you plan to freeze the muffins
- 1 batch fresh lemon glaze best option for a pretty presentation for a special brunch
Instructions
- Preheat the oven to 350°F. Line a 12-well standard muffin tin or a 6-well jumbo muffin tin with paper liners and set aside.
- Zest the lemons over a large mixing bowl. Squeeze the juice from the lemons right into the bowl.
- Add the melted butter to the lemon juice and whisk it in to cool. Add the eggs and beat them in until smooth. Add the sour cream and vanilla and whisk everything together.
- In a separate mixing bowl, add the flour, sugar, baking powder, baking soda, salt, and poppy seeds and whisk them together until well combined.
- Add the flour mixture to the lemony mixture. Carefully fold them together with a spatula until just combined. Do not over mix the batter or the muffins will be tough. It is ok if there are still a few dry streaks of flour.
- Spoon the batter evenly into the prepared muffin tin. Sprinkle the sparkling sugar over the tops of the muffins. (If you plan to decorate with lemon glaze later, skip the sparkling sugar now.)
- Bake the muffins for 20 - 22 minutes for standard size or 25 - 28 minutes for jumbo size. The muffins should be golden brown on the top and bounce back when you gently press the tops.
- If you want to decorate the muffins with a drizzle of lemon glaze, let the muffins cool on a wire rack first. Use the tines of a fork to drizzle the glaze over the top. Let set for a few minutes before serving.
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